smaht-pipeline-utils
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SMaHT Portal Pipeline Utilities
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smaht_pipeline_utils
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Portal Objects
File Format
File Reference
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Workflow
Pipeline
smaht-pipeline-utils
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Portal Objects
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Portal Objects
File Format
Template
Fields Definition
Required
name
extension
description
Optional
secondary_formats
File Reference
Template
Fields Definition
Required
name
description
format
version
Optional
secondary_files
status
license
category
type
Software
Template
Fields Definition
Required
name
version
commit
category
Optional
source_url
description
license
Workflow
Template
General Fields Definition
Required
name
description
runner
category
input
output
Optional
software
Input Definition
argument_type
Output Definition
argument_type
secondary_files
argument_to_be_attached_to
Pipeline
Template
General Fields Definition
Required
name
description
category
input
workflows
Optional
Workflows Definition
dependencies
shards
version
input
output
config
Input Definition
argument_type
files
value
Linking Fields
source
source_argument_name
Input Dimension Fields
scatter
gather
input_dimension
extra_dimension
gather_input
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